The BEST episodes written by Mike Thompson
#1 - The Rising
John Doe - Season 1 - Episode 21
John begins to experience an onslaught of bizarre visions and images then blacks out — the visions lead him to a faceless murder victim and a cannery where the Phoenix Organization and the remote viewers were situated. John meets Sam of the NSA (the murdered man is one of Sam's undercover agents) and they manage to capture the Trenchcoat Man and discovers he's not deaf and speaks fluently in Sanskrit and Latin. Trenchcoat hints at John's destiny, how he's one of them, and that Michael (from "Remote Control") may still be alive and a key to the mystery – then he escapes using strange mental abilities of his own. Sam introduces John as a "Class 1" to Lucas Doya, the founder of the U.S.'s own remote viewer program through the DoD — Doya puts John through a series of tests to heighten his own remote abilities and John locks on to Teresa in a copper mine. The NSA, Avery, and Frank close in with John as the remote viewers get a vision of the location of the Staff (from "Ashes to Ashes") in ...
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#2 - Ashes to Ashes
John Doe - Season 1 - Episode 14
Returning from Karen's art show, John thwarts a bomb threat but it's a ruse for the mysterious group that's been plaguing John to grab Karen. The group thinks John knows something about a staff with a phoenix on it and Karen may know it as well. The trail leads to a warehouse full of dead deaf people and then John gets snatched by the NSA. They want to know about "Phoenix" but John doesn't have a clue and the head guy, Sam, lets him go eventually. Karen manages to call John long enough to give him a clue leading him to . . . Horseshoe Island. Phoenix has evacuated it after an extensive excavating operation, leaving Karen's corpse behind. The gang bury Karen and decorate her building with her last painting. But the mystery isn't quite over — John gets a report that "Yellow Teeth" is barely alive — he visits her and she warns that Phoenix is seeking a staff tied into his destiny and they won't stop coming until they get it. She dies, and the audience sees the staff is in the Vatican.
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#3 - Doe or Die
John Doe - Season 1 - Episode 17
Ken Rothman, an ex-police officer that Avery got fired for beating a suspect, gets into the police HQ by faking his death and he and his men quickly take the station and most of the staff (except Frank) hostage. Rothman demands his reputation be cleared, but John manages to get free and escape into the building, and soon discovers Rothman has a supply of Russian-made smallpox. John manages to take out a few terrorists before being recaptured and Rothman leaves John and Avery behind with a shattered vial of smallpox. It's fake, but the whole thing is a ploy to get hold of smallpox vaccine to sell as a bio-weapon. Doe figures it out and they capture Rothman just in time.
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#4 - Save As... John Doe
John Doe - Season 1 - Episode 18
A woman, Paulette, picks up a locked case and has it stolen, then comes to John for help. Moretti, a dead scientist, developed chips to augment the human brain and left them to her. John accepts, believing chip-augmented brain processes may be connected to him. The trail leads to Moretti's house and a dead man — the thief, then to a on-line escort service where it turns out Paulette works. John figures out Paulette has the key on her charm bracelet and opens the case — it has a motherboard set up like a map of the city, and John and Paulette track the location to an abandoned basement being used as a lab with comatose accident victims being used as subjects in the chip experiments. Then they figure out the case contents have bar codes but when John scans them for info a hacker starts blowing up city sites through the electrical and water system and demands the case be given to him. John takes the case and tracks the hacker back to a nearby mall — it's Moretti's assistant Johansen...
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#5 - Blood Lines
John Doe - Season 1 - Episode 2
While continuing his quest to figure out who he is and from where he came, John Doe must use all his unique abilities to solve a gruesome murder case, initiated when a seemingly innocent individual dives into a swimming pool which he discovers is filled with human blood. Meanwhile, Lt. Jamie Avery, impressed with Doe's ability to help the police with the case, attempts to surreptitiously learn his real identity. Karen is fired from her waitress job at The Sea and convinces Doe that he needs her as his assistant. Also, a mysterious woman may have information on Doe's identity.
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#6 - Pilot
John Doe - Season 1 - Episode 1
John awakens to find himself stranded on an island off Seattle. His uncanny abilities are soon apparent to him when he is rescued by Asian fishermen and begins to speak the sailors' language fluently. When he sees a news report about a kidnapped girl, the color-blind Doe realizes that he is seeing the child in color. Sure that she holds the key to the mystery of who he is, Doe is eager to find her and offers his assistance to the skeptical police.
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